Changelog

Source: NEWS.md

slurmjobs 1.2.5

BUG FIXES

• Fix currently running jobs crashing job_report()

slurmjobs 1.2.4

BUG FIXES

• Recognize/ handle OUT_OF_MEMORY job status, fixing a fatal error in job_report()

slurmjobs 1.2.3

BUG FIXES

• Fix submission of jobs, modification of the appropriate shell script, and finding of log files when using array_submit() with an absolute path to the name parameter

slurmjobs 1.2.2

• Use the HOSTNAME instead of SLURMD_NODENAME environment variable to determine host running a SLURM job

slurmjobs 1.2.1

BUG FIXES

• Recognize cancelled jobs as completed, allowing job_report() to continue without errors when attempting to retrieve memory info for finished jobs

slurmjobs 1.2.0

• job_single() and job_loop() accept a new parameter, time_limit, which default to 1 day

slurmjobs 1.1.0

NEW FEATURES

• job_single(), job_loop(), and array_submit() now may accept a name, relative path, or absolute path as the name argument. This means the working directory is no longer relevant in successfully calling these functions
• job_info() and job_report() now also return a wallclock_time column, giving the elapsed wallclock time of jobs as difftimes

slurmjobs 1.0.0

NEW FEATURES

• Two additional monitoring functions: job_report() and partition_info()
• Two new job-submission functions: array_submit() and job_loop()
• New data included as part of the package: job_info_df and partition_df. Example outputs of job_info() and partition_info()

SIGNIFICANT USER-VISIBLE CHANGES

• Memory for job_single() and job_loop() is now specified in total (i.e. through --mem) instead of per core (i.e. through --mem-per-cpu)
• Complete vignette and documentation

slurmjobs 0.99.0

NEW FEATURES

• Added a NEWS.md file to track changes to the package.
• Added core files (such as DESCRIPTION, NAMESPACE, etc) to make slurmjobs a Bioconductor-style package

SIGNIFICANT USER-VISIBLE CHANGES

• Experimental job_info() function
• Experimental job_single() function