Helper function to select which experimental model will be used to generate the qSVs.
select_transcripts(type = c("cell_component", "top1500", "standard"))A character(1) specifying the transcripts set type.
These were determined by Joshua M. Stolz et al, 2022. Here the names "cell_component", "top1500", and "standard" refer to models that were determined to be effective in removing degradation effects.
The "standard" model involves taking the union of the top 1000 transcripts associated with degradation from the interaction model and the main effect model.
The "top1500" model is the same as the "standard model except the union of the top 1500 genes associated with degradation is selected.
The most effective of our models, "cell_component", involved deconvolution of the degradation matrix to determine the proportion of cell types within our studied tissue.
These proportions were then added to our model.matrix() and the union of the top 1000 transcripts in the interaction model, the main effect model, and the cell proportions model were used to generate this model of qSVs.
A character() with the transcript IDs.
## Default set of transcripts associated with degradation
sig_transcripts <- select_transcripts()
length(sig_transcripts)
#> [1] 2976
head(sig_transcripts)
#> [1] "ENST00000442987.3" "ENST00000623083.3" "ENST00000424587.6"
#> [4] "ENST00000599771.6" "ENST00000416931.1" "ENST00000457540.1"
## Example where match.arg() auto-completes
select_transcripts("top")
#> [1] "ENST00000442987.3" "ENST00000457540.1"
#> [3] "ENST00000514057.1" "ENST00000506640.2"
#> [5] "ENST00000587530.5" "ENST00000398216.2"
#> [7] "ENST00000379370.6" "ENST00000461111.1"
#> [9] "ENST00000480643.1" "ENST00000492936.5"
#> [11] "ENST00000467278.5" "ENST00000379037.6"
#> [13] "ENST00000472541.5" "ENST00000354980.7"
#> [15] "ENST00000478065.5" "ENST00000462432.5"
#> [17] "ENST00000359060.5" "ENST00000477990.1"
#> [19] "ENST00000598846.1" "ENST00000475229.2"
#> [21] "ENST00000378536.4" "ENST00000469374.5"
#> [23] "ENST00000513135.5" "ENST00000445300.1"
#> [25] "ENST00000337907.7" "ENST00000377464.5"
#> [27] "ENST00000377403.6" "ENST00000340305.9"
#> [29] "ENST00000376936.8" "ENST00000474216.5"
#> [31] "ENST00000400797.3" "ENST00000375759.7"
#> [33] "ENST00000263511.8" "ENST00000591316.1"
#> [35] "ENST00000412962.3" "ENST00000635081.1"
#> [37] "ENST00000375541.9" "ENST00000463860.5"
#> [39] "ENST00000375415.5" "ENST00000457194.6"
#> [41] "ENST00000488722.5" "ENST00000430808.1"
#> [43] "ENST00000464457.1" "ENST00000464577.1"
#> [45] "ENST00000449467.2" "ENST00000593639.5"
#> [47] "ENST00000473314.6" "ENST00000566599.1"
#> [49] "ENST00000361547.6" "ENST00000466284.1"
#> [51] "ENST00000513116.1" "ENST00000374291.5"
#> [53] "ENST00000470037.1" "ENST00000374278.7"
#> [55] "ENST00000451482.1" "ENST00000487944.5"
#> [57] "ENST00000247087.9" "ENST00000373839.7"
#> [59] "ENST00000624273.1" "ENST00000602813.1"
#> [61] "ENST00000440538.6" "ENST00000465256.5"
#> [63] "ENST00000366152.3" "ENST00000373510.8"
#> [65] "ENST00000373481.7" "ENST00000397572.4"
#> [67] "ENST00000465771.3" "ENST00000472385.1"
#> [69] "ENST00000487871.1" "ENST00000565390.2"
#> [71] "ENST00000492956.1" "ENST00000357658.3"
#> [73] "ENST00000406439.6" "ENST00000634258.1"
#> [75] "ENST00000562955.1" "ENST00000616338.1"
#> [77] "ENST00000488433.5" "ENST00000372192.3"
#> [79] "ENST00000361297.6" "ENST00000469150.1"
#> [81] "ENST00000574428.5" "ENST00000366181.2"
#> [83] "ENST00000483007.1" "ENST00000569869.1"
#> [85] "ENST00000371316.3" "ENST00000636386.1"
#> [87] "ENST00000634281.1" "ENST00000498273.1"
#> [89] "ENST00000637208.1" "ENST00000424995.1"
#> [91] "ENST00000327299.7" "ENST00000371039.5"
#> [93] "ENST00000502413.2" "ENST00000355356.3"
#> [95] "ENST00000478255.1" "ENST00000294678.6"
#> [97] "ENST00000331835.9" "ENST00000355754.6"
#> [99] "ENST00000610020.1" "ENST00000602631.1"
#> [101] "ENST00000421202.5" "ENST00000436063.6"
#> [103] "ENST00000546444.1" "ENST00000421762.5"
#> [105] "ENST00000424943.1" "ENST00000561881.1"
#> [107] "ENST00000634594.1" "ENST00000418344.1"
#> [109] "ENST00000457507.1" "ENST00000338366.5"
#> [111] "ENST00000361066.6" "ENST00000631307.2"
#> [113] "ENST00000562952.1" "ENST00000439736.1"
#> [115] "ENST00000428411.5" "ENST00000421157.1"
#> [117] "ENST00000358528.8" "ENST00000369500.3"
#> [119] "ENST00000491156.1" "ENST00000423984.2"
#> [121] "ENST00000440150.5" "ENST00000493622.5"
#> [123] "ENST00000612480.2" "ENST00000614586.2"
#> [125] "ENST00000415381.1" "ENST00000612094.1"
#> [127] "ENST00000611931.4" "ENST00000477558.1"
#> [129] "ENST00000369068.4" "ENST00000479372.1"
#> [131] "ENST00000485040.5" "ENST00000458013.6"
#> [133] "ENST00000382265.3" "ENST00000368801.2"
#> [135] "ENST00000491790.1" "ENST00000634544.1"
#> [137] "ENST00000417868.1" "ENST00000361217.8"
#> [139] "ENST00000485359.1" "ENST00000361546.6"
#> [141] "ENST00000368489.3" "ENST00000463920.5"
#> [143] "ENST00000506037.1" "ENST00000496332.5"
#> [145] "ENST00000481822.1" "ENST00000497188.1"
#> [147] "ENST00000478756.1" "ENST00000313146.10"
#> [149] "ENST00000482651.5" "ENST00000497286.5"
#> [151] "ENST00000415019.1" "ENST00000368073.7"
#> [153] "ENST00000356006.3" "ENST00000367993.7"
#> [155] "ENST00000602747.1" "ENST00000367889.7"
#> [157] "ENST00000392129.10" "ENST00000607611.1"
#> [159] "ENST00000489398.1" "ENST00000524967.5"
#> [161] "ENST00000367742.7" "ENST00000367694.2"
#> [163] "ENST00000414890.1" "ENST00000473640.1"
#> [165] "ENST00000367639.1" "ENST00000483123.1"
#> [167] "ENST00000411509.1" "ENST00000400968.6"
#> [169] "ENST00000461742.6" "ENST00000367302.5"
#> [171] "ENST00000341360.6" "ENST00000272203.7"
#> [173] "ENST00000637508.1" "ENST00000367175.1"
#> [175] "ENST00000444037.1" "ENST00000404977.6"
#> [177] "ENST00000492085.1" "ENST00000503221.1"
#> [179] "ENST00000608023.5" "ENST00000455509.1"
#> [181] "ENST00000486666.5" "ENST00000563417.1"
#> [183] "ENST00000440104.1" "ENST00000617077.1"
#> [185] "ENST00000540997.2" "ENST00000443112.6"
#> [187] "ENST00000497165.5" "ENST00000453943.5"
#> [189] "ENST00000497623.1" "ENST00000366576.3"
#> [191] "ENST00000447095.5" "ENST00000319653.13"
#> [193] "ENST00000424448.2" "ENST00000451408.2"
#> [195] "ENST00000476722.6" "ENST00000493334.1"
#> [197] "ENST00000366523.5" "ENST00000365314.1"
#> [199] "ENST00000602387.5" "ENST00000469147.5"
#> [201] "ENST00000433382.5" "ENST00000497597.5"
#> [203] "ENST00000469400.1" "ENST00000454224.1"
#> [205] "ENST00000496383.5" "ENST00000486484.5"
#> [207] "ENST00000418420.1" "ENST00000404666.6"
#> [209] "ENST00000469867.1" "ENST00000264709.7"
#> [211] "ENST00000406659.3" "ENST00000447070.1"
#> [213] "ENST00000507184.5" "ENST00000476264.6"
#> [215] "ENST00000492196.1" "ENST00000319406.8"
#> [217] "ENST00000295065.9" "ENST00000462504.1"
#> [219] "ENST00000578326.2" "ENST00000402297.5"
#> [221] "ENST00000606229.1" "ENST00000626865.2"
#> [223] "ENST00000609128.5" "ENST00000409328.5"
#> [225] "ENST00000443213.5" "ENST00000445520.5"
#> [227] "ENST00000318522.9" "ENST00000409946.5"
#> [229] "ENST00000444696.5" "ENST00000263734.4"
#> [231] "ENST00000420788.2" "ENST00000587616.1"
#> [233] "ENST00000462791.1" "ENST00000406053.5"
#> [235] "ENST00000395315.2" "ENST00000491592.1"
#> [237] "ENST00000272317.10" "ENST00000403007.4"
#> [239] "ENST00000596663.5" "ENST00000589496.2"
#> [241] "ENST00000405289.5" "ENST00000409562.7"
#> [243] "ENST00000436321.5" "ENST00000449995.1"
#> [245] "ENST00000428647.1" "ENST00000489327.1"
#> [247] "ENST00000406297.7" "ENST00000409116.5"
#> [249] "ENST00000520186.1" "ENST00000484298.5"
#> [251] "ENST00000272425.3" "ENST00000450720.5"
#> [253] "ENST00000476689.5" "ENST00000444342.2"
#> [255] "ENST00000421951.5" "ENST00000454490.1"
#> [257] "ENST00000635968.1" "ENST00000544283.5"
#> [259] "ENST00000608531.1" "ENST00000463940.1"
#> [261] "ENST00000448494.1" "ENST00000488084.1"
#> [263] "ENST00000420699.6" "ENST00000621110.4"
#> [265] "ENST00000613749.4" "ENST00000620023.4"
#> [267] "ENST00000610408.4" "ENST00000612970.4"
#> [269] "ENST00000596026.5" "ENST00000604397.5"
#> [271] "ENST00000620272.4" "ENST00000609751.2"
#> [273] "ENST00000619740.1" "ENST00000463367.1"
#> [275] "ENST00000289371.10" "ENST00000469971.5"
#> [277] "ENST00000233154.8" "ENST00000609972.1"
#> [279] "ENST00000393321.2" "ENST00000481729.1"
#> [281] "ENST00000393283.5" "ENST00000603748.1"
#> [283] "ENST00000538033.2" "ENST00000467600.5"
#> [285] "ENST00000494909.5" "ENST00000488208.1"
#> [287] "ENST00000476149.1" "ENST00000462306.5"
#> [289] "ENST00000415406.1" "ENST00000528247.1"
#> [291] "ENST00000491265.1" "ENST00000438378.2"
#> [293] "ENST00000431979.1" "ENST00000437330.1"
#> [295] "ENST00000452011.1" "ENST00000409606.5"
#> [297] "ENST00000264170.8" "ENST00000409869.5"
#> [299] "ENST00000407073.5" "ENST00000637997.1"
#> [301] "ENST00000464066.5" "ENST00000460377.1"
#> [303] "ENST00000483316.1" "ENST00000429684.1"
#> [305] "ENST00000624969.1" "ENST00000421875.5"
#> [307] "ENST00000409050.1" "ENST00000487689.1"
#> [309] "ENST00000492964.1" "ENST00000435711.5"
#> [311] "ENST00000453026.6" "ENST00000264065.11"
#> [313] "ENST00000429412.1" "ENST00000481132.5"
#> [315] "ENST00000414174.1" "ENST00000417098.5"
#> [317] "ENST00000309955.7" "ENST00000435125.1"
#> [319] "ENST00000425226.1" "ENST00000376135.5"
#> [321] "ENST00000449699.5" "ENST00000625193.1"
#> [323] "ENST00000448277.5" "ENST00000411432.5"
#> [325] "ENST00000478701.1" "ENST00000457374.5"
#> [327] "ENST00000431941.6" "ENST00000607412.1"
#> [329] "ENST00000420712.1" "ENST00000171887.8"
#> [331] "ENST00000461911.1" "ENST00000449707.5"
#> [333] "ENST00000302625.5" "ENST00000497882.5"
#> [335] "ENST00000463792.5" "ENST00000462351.5"
#> [337] "ENST00000485813.5" "ENST00000497589.1"
#> [339] "ENST00000607654.1" "ENST00000419964.1"
#> [341] "ENST00000488477.2" "ENST00000431952.1"
#> [343] "ENST00000494901.5" "ENST00000434477.5"
#> [345] "ENST00000492481.1" "ENST00000244815.9"
#> [347] "ENST00000473815.1" "ENST00000607357.1"
#> [349] "ENST00000264039.6" "ENST00000425056.5"
#> [351] "ENST00000495100.1" "ENST00000486058.5"
#> [353] "ENST00000320389.11" "ENST00000431776.5"
#> [355] "ENST00000463388.1" "ENST00000461048.5"
#> [357] "ENST00000479427.5" "ENST00000494132.1"
#> [359] "ENST00000636051.1" "ENST00000470005.1"
#> [361] "ENST00000452802.5" "ENST00000485983.6"
#> [363] "ENST00000470951.5" "ENST00000431285.5"
#> [365] "ENST00000302463.10" "ENST00000602976.1"
#> [367] "ENST00000424442.5" "ENST00000466141.1"
#> [369] "ENST00000326434.9" "ENST00000412055.5"
#> [371] "ENST00000256474.2" "ENST00000460129.5"
#> [373] "ENST00000414969.2" "ENST00000439861.5"
#> [375] "ENST00000618604.4" "ENST00000613206.1"
#> [377] "ENST00000254508.6" "ENST00000496484.1"
#> [379] "ENST00000417717.6" "ENST00000412097.5"
#> [381] "ENST00000492552.5" "ENST00000425296.1"
#> [383] "ENST00000470132.1" "ENST00000356047.3"
#> [385] "ENST00000436236.1" "ENST00000429976.5"
#> [387] "ENST00000232974.10" "ENST00000265562.4"
#> [389] "ENST00000470959.1" "ENST00000328333.12"
#> [391] "ENST00000164024.4" "ENST00000476645.1"
#> [393] "ENST00000492077.5" "ENST00000472301.5"
#> [395] "ENST00000484115.5" "ENST00000454011.6"
#> [397] "ENST00000296452.4" "ENST00000446471.1"
#> [399] "ENST00000495880.1" "ENST00000233027.9"
#> [401] "ENST00000472528.5" "ENST00000636627.1"
#> [403] "ENST00000477024.5" "ENST00000583516.1"
#> [405] "ENST00000465659.5" "ENST00000478570.5"
#> [407] "ENST00000443346.1" "ENST00000491583.1"
#> [409] "ENST00000608169.5" "ENST00000463183.1"
#> [411] "ENST00000492922.1" "ENST00000485126.1"
#> [413] "ENST00000489193.1" "ENST00000629295.1"
#> [415] "ENST00000483969.5" "ENST00000608028.1"
#> [417] "ENST00000489060.1" "ENST00000484698.5"
#> [419] "ENST00000482139.1" "ENST00000478791.1"
#> [421] "ENST00000465803.1" "ENST00000473171.5"
#> [423] "ENST00000469870.1" "ENST00000483793.5"
#> [425] "ENST00000483658.1" "ENST00000612737.1"
#> [427] "ENST00000610060.1" "ENST00000614362.1"
#> [429] "ENST00000468859.1" "ENST00000514908.5"
#> [431] "ENST00000468137.5" "ENST00000464431.1"
#> [433] "ENST00000265062.7" "ENST00000514355.5"
#> [435] "ENST00000324093.8" "ENST00000504808.2"
#> [437] "ENST00000515418.1" "ENST00000468074.1"
#> [439] "ENST00000478647.1" "ENST00000624916.1"
#> [441] "ENST00000567488.1" "ENST00000514629.1"
#> [443] "ENST00000392993.6" "ENST00000361875.7"
#> [445] "ENST00000491549.5" "ENST00000490357.1"
#> [447] "ENST00000497658.5" "ENST00000334567.9"
#> [449] "ENST00000412756.6" "ENST00000489868.5"
#> [451] "ENST00000488149.5" "ENST00000242810.10"
#> [453] "ENST00000313143.7" "ENST00000273794.5"
#> [455] "ENST00000310118.8" "ENST00000487475.5"
#> [457] "ENST00000497070.1" "ENST00000382191.4"
#> [459] "ENST00000482913.1" "ENST00000410651.1"
#> [461] "ENST00000445430.5" "ENST00000631288.2"
#> [463] "ENST00000625338.1" "ENST00000630675.2"
#> [465] "ENST00000485430.1" "ENST00000416152.5"
#> [467] "ENST00000333602.10" "ENST00000481865.5"
#> [469] "ENST00000489628.1" "ENST00000570130.1"
#> [471] "ENST00000440850.5" "ENST00000432047.4"
#> [473] "ENST00000434143.5" "ENST00000495285.1"
#> [475] "ENST00000492681.1" "ENST00000507981.1"
#> [477] "ENST00000471364.1" "ENST00000330198.8"
#> [479] "ENST00000506646.5" "ENST00000513239.5"
#> [481] "ENST00000314167.8" "ENST00000452360.6"
#> [483] "ENST00000514669.5" "ENST00000469068.1"
#> [485] "ENST00000513372.5" "ENST00000514248.1"
#> [487] "ENST00000505421.1" "ENST00000510632.1"
#> [489] "ENST00000637812.1" "ENST00000515571.5"
#> [491] "ENST00000513943.5" "ENST00000507028.1"
#> [493] "ENST00000505907.1" "ENST00000441093.1"
#> [495] "ENST00000513449.6" "ENST00000511366.2"
#> [497] "ENST00000515343.1" "ENST00000505089.6"
#> [499] "ENST00000509654.5" "ENST00000515495.1"
#> [501] "ENST00000509022.5" "ENST00000507794.2"
#> [503] "ENST00000402522.1" "ENST00000504032.1"
#> [505] "ENST00000513977.2" "ENST00000508560.5"
#> [507] "ENST00000509886.5" "ENST00000623090.1"
#> [509] "ENST00000510785.1" "ENST00000508554.1"
#> [511] "ENST00000500538.6" "ENST00000310613.7"
#> [513] "ENST00000530128.5" "ENST00000529625.5"
#> [515] "ENST00000506754.1" "ENST00000505068.5"
#> [517] "ENST00000504952.1" "ENST00000513908.1"
#> [519] "ENST00000515468.1" "ENST00000506614.1"
#> [521] "ENST00000514671.5" "ENST00000509263.5"
#> [523] "ENST00000273908.4" "ENST00000515303.2"
#> [525] "ENST00000508262.1" "ENST00000503414.5"
#> [527] "ENST00000509407.5" "ENST00000535835.5"
#> [529] "ENST00000510505.1" "ENST00000351450.10"
#> [531] "ENST00000309733.5" "ENST00000491608.2"
#> [533] "ENST00000504110.1" "ENST00000505556.1"
#> [535] "ENST00000503661.5" "ENST00000567769.1"
#> [537] "ENST00000506852.1" "ENST00000335251.10"
#> [539] "ENST00000326639.10" "ENST00000608661.1"
#> [541] "ENST00000506264.5" "ENST00000602666.1"
#> [543] "ENST00000507296.1" "ENST00000274054.2"
#> [545] "ENST00000508856.1" "ENST00000534918.1"
#> [547] "ENST00000607068.1" "ENST00000522356.1"
#> [549] "ENST00000503758.6" "ENST00000511193.1"
#> [551] "ENST00000512190.1" "ENST00000512775.1"
#> [553] "ENST00000493082.5" "ENST00000483234.5"
#> [555] "ENST00000399869.1" "ENST00000514519.1"
#> [557] "ENST00000506305.1" "ENST00000489501.1"
#> [559] "ENST00000506299.1" "ENST00000503788.5"
#> [561] "ENST00000515710.1" "ENST00000502585.1"
#> [563] "ENST00000623455.1" "ENST00000512559.5"
#> [565] "ENST00000504866.1" "ENST00000502489.5"
#> [567] "ENST00000504430.5" "ENST00000509957.5"
#> [569] "ENST00000325110.10" "ENST00000606697.5"
#> [571] "ENST00000508123.1" "ENST00000637305.1"
#> [573] "ENST00000512159.1" "ENST00000504880.5"
#> [575] "ENST00000502326.7" "ENST00000512069.6"
#> [577] "ENST00000624505.1" "ENST00000503882.1"
#> [579] "ENST00000403625.6" "ENST00000518813.5"
#> [581] "ENST00000512045.5" "ENST00000506736.1"
#> [583] "ENST00000521942.5" "ENST00000508917.6"
#> [585] "ENST00000614488.4" "ENST00000507968.1"
#> [587] "ENST00000504293.5" "ENST00000445770.3"
#> [589] "ENST00000606183.3" "ENST00000508130.5"
#> [591] "ENST00000510228.1" "ENST00000502752.1"
#> [593] "ENST00000506875.1" "ENST00000508376.6"
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#> [771] "ENST00000306177.9" "ENST00000382252.5"
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#> [807] "ENST00000609770.1" "ENST00000498380.6"
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#> [843] "ENST00000473347.1" "ENST00000451963.1"
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#> [847] "ENST00000310771.8" "ENST00000275732.5"
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#> [851] "ENST00000563237.2" "ENST00000496391.5"
#> [853] "ENST00000488284.6" "ENST00000503564.5"
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#> [857] "ENST00000519541.1" "ENST00000358438.6"
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#> [861] "ENST00000631092.1" "ENST00000468999.1"
#> [863] "ENST00000425651.6" "ENST00000445634.2"
#> [865] "ENST00000489800.1" "ENST00000447785.1"
#> [867] "ENST00000457033.5" "ENST00000420594.5"
#> [869] "ENST00000608477.1" "ENST00000605862.4"
#> [871] "ENST00000465971.1" "ENST00000471258.1"
#> [873] "ENST00000450885.2" "ENST00000629111.1"
#> [875] "ENST00000477515.2" "ENST00000480137.1"
#> [877] "ENST00000446198.5" "ENST00000378555.7"
#> [879] "ENST00000483726.1" "ENST00000541170.7"
#> [881] "ENST00000428878.6" "ENST00000492720.5"
#> [883] "ENST00000497095.5" "ENST00000489654.1"
#> [885] "ENST00000322764.9" "ENST00000479102.1"
#> [887] "ENST00000637555.1" "ENST00000627071.1"
#> [889] "ENST00000434415.5" "ENST00000247930.4"
#> [891] "ENST00000472212.5" "ENST00000223210.4"
#> [893] "ENST00000358849.8" "ENST00000476375.5"
#> [895] "ENST00000481434.5" "ENST00000359321.1"
#> [897] "ENST00000425591.1" "ENST00000448767.1"
#> [899] "ENST00000435514.3" "ENST00000407559.7"
#> [901] "ENST00000523053.1" "ENST00000518895.1"
#> [903] "ENST00000524139.5" "ENST00000634128.1"
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#> [907] "ENST00000567210.1" "ENST00000633906.1"
#> [909] "ENST00000633198.1" "ENST00000509557.1"
#> [911] "ENST00000519726.2" "ENST00000590591.1"
#> [913] "ENST00000521242.1" "ENST00000513168.1"
#> [915] "ENST00000524047.5" "ENST00000606115.1"
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#> [987] "ENST00000530445.5" "ENST00000436759.6"
#> [989] "ENST00000527303.1" "ENST00000525287.5"
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#> [997] "ENST00000380394.8" "ENST00000495827.2"
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#> [1017] "ENST00000478218.1" "ENST00000613254.1"
#> [1019] "ENST00000622129.4" "ENST00000455336.2"
#> [1021] "ENST00000484581.6" "ENST00000585776.5"
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#> [1051] "ENST00000627543.2" "ENST00000441149.6"
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#> [1091] "ENST00000406427.5" "ENST00000371443.5"
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#> [1111] "ENST00000374323.8" "ENST00000374328.3"
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#> [1131] "ENST00000372391.6" "ENST00000619972.1"
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#> [1143] "ENST00000369893.9" "ENST00000609691.1"
#> [1145] "ENST00000489783.1" "ENST00000432306.5"
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#> [1149] "ENST00000617191.1" "ENST00000338492.8"
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#> [1163] "ENST00000608655.5" "ENST00000533064.1"
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#> [1175] "ENST00000527788.5" "ENST00000532231.1"
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#> [1181] "ENST00000527211.5" "ENST00000531648.5"
#> [1183] "ENST00000624693.1" "ENST00000469699.1"
#> [1185] "ENST00000525705.1" "ENST00000530595.1"
#> [1187] "ENST00000388857.8" "ENST00000527599.1"
#> [1189] "ENST00000531007.1" "ENST00000525821.1"
#> [1191] "ENST00000411426.1" "ENST00000539332.2"
#> [1193] "ENST00000623008.1" "ENST00000540906.1"
#> [1195] "ENST00000537328.5" "ENST00000403734.2"
#> [1197] "ENST00000531709.6" "ENST00000540798.5"
#> [1199] "ENST00000543123.1" "ENST00000246841.3"
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#> [2615] "ENST00000361681.2" "ENST00000361789.2"