All functions |
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Differential expression quality (DEqual) plot |
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Check validity of transcript vectors |
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RSE object of RNA-seq data that serves as output for degradation analysis |
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Degradation time t-statistics |
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Obtain expression matrix for degraded transcripts |
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PCs from transcripts |
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Generate matrix of qsvs |
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Apply num.sv algorithm to determine the number of pcs to be included |
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A wrapper function used to perform qSVA in one step. |
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Select transcripts associated with degradation |
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Transcripts for Degradation Models |